Metabolic Trigger Identified That Shuts Down Key Tumor‑Fighting Gene

Glutamine-Driven Silencing of BATF2 Weakens Tumor Immunity in Head and Neck Cancer

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The results demonstrate that glutamine in the tumor microenvironment can cause epigenetic silencing of BATF2, which affects the STING signaling pathway and overall immune response. AI image for illustration purposes
The results demonstrate that glutamine in the tumor microenvironment can cause epigenetic silencing of BATF2, which affects the STING signaling pathway and overall immune response. AI image for illustration purposes
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By University of Texas MD Anderson Cancer Center 

Newswise – A novel tumor suppressor, BATF2, can be silenced by factors in the tumor microenvironment, leading to a reduced immune response in five preclinical models of head and neck cancer, according to researchers from The University of Texas MD Anderson Cancer Center

Yu Leo Lei, D.D.S., Ph.D. Image MD Anderson via Newswise

The study, published in Nature Communications, was led by Yu Leo Lei, D.D.S., Ph.D., associate professor of Head and Neck SurgeryCancer Biology and Translational Molecular Pathology. The results demonstrate that glutamine in the tumor microenvironment can cause epigenetic silencing of BATF2, which affects the STING signaling pathway and overall immune response.

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“The canonical tumor suppressors are frequently mutated or lost at the genetic level. Emerging evidence highlights the importance of a new type of tumor suppressor that is not frequently mutated but is epigenetically inhibited by unique metabolic cues in the tumor microenvironment,” Lei said. “This study characterizes a novel oral cancer tumor suppressor that drives immune surveillance but is inhibited by high levels of glutamine.”

What is BATF2 and how does it help with immunity?

BATF2 is a tumor suppressor involved in regulating immune responses, helping to maintain anti-tumor immune surveillance. BATF2 is highly expressed by epithelial cells and myeloid cells, and it can directly activate the STING pathway – which plays a key role in innate immunity by triggering Type-I interferon (IFN-I) production to drive T cell-mediated protection against tumors.

In this study, researchers found that BATF2 levels correlate strongly with IFN-I and Th1 immune signatures in patient tumors, meaning that high levels of BATF2 help recruit immune cells to attack tumors.

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How does glutamine affect BATF2 and cancer cells? 

Many cancers are resistant to treatments that trigger the STING pathway. More recently, studies have shown that epigenetic changes – which turn genes on and off without changing the actual DNA sequence – can occur from metabolic cues in the tumor microenvironment. 

In particular, BATF2 and IFN-I genes are inversely correlated with genes involved in the metabolism of glutamine – an amino acid that cells use for growth – suggesting a possible connection.

The study showed that a glutamine-rich diet silences the BATF2gene, leading to a weakened immune response, lower levels of IFN-I production and higher oxygen consumption, allowing cancer cells to grow and avoid immune detection. Using drugs that inhibit glutamine metabolism significantly restored IFN-I production and sensitized cancer cells to drugs that target the STING pathway, improving the overall antitumor response.

What does this mean for patients with head and neck cancer?

While these results are preclinical and further studies are needed, these findings suggest that controlling glutamine levels to enhance BATF2expression in the tumor microenvironment could potentially improve the immune response in patients with head and neck cancers that were resistant to treatments that affect the STING pathway.

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This work was supported by the National Institutes of Health (NIH). For a full list of collaborating authors, disclosures and funding sources, see the full paper in Nature Communications.

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